BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B11SP1|AL428340
(904 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig528 1699 0.0
>3x_Contig528
Length = 1800
Score = 1699 bits (857), Expect = 0.0
Identities = 857/857 (100%)
Strand = Plus / Minus
Query: 48 cattaatactgtttcataaaaattagccattaaccctgtaatttgccatatatttttcat 107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1793 cattaatactgtttcataaaaattagccattaaccctgtaatttgccatatatttttcat 1734
Query: 108 tagttggaactctaaagccgacattctttcatcaaaagtcactttttgtaggaaagacat 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 tagttggaactctaaagccgacattctttcatcaaaagtcactttttgtaggaaagacat 1674
Query: 168 caatataatttgtgaatcacgcttacctctgttaccaggcttcgctgagccttgttcttc 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1673 caatataatttgtgaatcacgcttacctctgttaccaggcttcgctgagccttgttcttc 1614
Query: 228 agctgtaccacattttacaatggtgataattggaacacgttgctgattttcggcgggtat 287
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 agctgtaccacattttacaatggtgataattggaacacgttgctgattttcggcgggtat 1554
Query: 288 ggtggattcatcgtatttataaaacccagcatatatttttgccatattatgtctttttgc 347
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 ggtggattcatcgtatttataaaacccagcatatatttttgccatattatgtctttttgc 1494
Query: 348 gccaactgcaattgcaacgtaaggataagctgtaacttgctccttgggaatcacaaagtc 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1493 gccaactgcaattgcaacgtaaggataagctgtaacttgctccttgggaatcacaaagtc 1434
Query: 408 ttccatcatatctaatactatgtccggggtggttctgtcattaccagaacctttaataat 467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1433 ttccatcatatctaatactatgtccggggtggttctgtcattaccagaacctttaataat 1374
Query: 468 accatcgcagattacaacgattaatttatgagagtttggataatctgtggttgcaatgga 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1373 accatcgcagattacaacgattaatttatgagagtttggataatctgtggttgcaatgga 1314
Query: 528 atctaatgttgttcttaaacctacctcatcttctgaataacaggtgacacagcagagtga 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1313 atctaatgttgttcttaaacctacctcatcttctgaataacaggtgacacagcagagtga 1254
Query: 588 gtgaaccaatggaaatccatagggcatgaagtctgggggcggctgtaatactgcatcggg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1253 gtgaaccaatggaaatccatagggcatgaagtctgggggcggctgtaatactgcatcggg 1194
Query: 648 gtgaatgatcgttggatctaacgattccatagtcattgaagtaccgaaaggatcaagatt 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1193 gtgaatgatcgttggatctaacgattccatagtcattgaagtaccgaaaggatcaagatt 1134
Query: 708 gtcggaaaaaggattaatagtggagaccggtcttgactgcgaggcgaatccagcatgtgc 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1133 gtcggaaaaaggattaatagtggagaccggtcttgactgcgaggcgaatccagcatgtgc 1074
Query: 768 actttttctcttcatttcattcatatatgctgatttcagcacggattgtgtagtcattgt 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1073 actttttctcttcatttcattcatatatgctgatttcagcacggattgtgtagtcattgt 1014
Query: 828 agacataccagtactttcaaggctctgaatgacaggatcattcaagtgtacagatttacc 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 agacataccagtactttcaaggctctgaatgacaggatcattcaagtgtacagatttacc 954
Query: 888 caatgattgttggctaa 904
|||||||||||||||||
Sbjct: 953 caatgattgttggctaa 937
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6374
Number of Sequences: 1807
Number of extensions: 6374
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)